Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs58645952 chr17:58185224 C/T 0.000123 111 15.17 19.23 0 KM Plot
LAML rs58648118 chr19:33916203 A/AAAAC 3.29E-5 107 19.23 16.23 2.02 KM Plot
LAML rs58672212 chr19:16235369 G/A 0.000133 107 16.2 8.13 0 KM Plot
LAML rs590557 chr2:31461395 A/G 5.31E-5 111 0 19.75 12.65 KM Plot
LAML rs59253852 chr19:33914440 G/A 3.67E-5 109 15.7 12.17 3 KM Plot
LAML rs59481336 chr2:1051964 G/GC 1.29E-8 106 15.17 16.3 0 KM Plot
LAML rs59701878 chr17:28569375 C/CCTCACCCTTGACGTCT 2.17E-6 110 19.82 18.28 6.13 KM Plot
LAML rs598324 chr13:21844915 G/A 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs598754 chr13:21845010 C/A 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs59905513 chr14:90749638 T/C 1.32E-5 108 13.2 21.87 1.03 KM Plot
LAML rs59986066 chr1:893461 TC/T 0.000158 110 0 16.17 14.22 KM Plot
LAML rs60071288 chr2:242425939 C/CATT 8.12E-5 109 1.53 14.63 17.23 KM Plot
LAML rs60263530 chr2:1051883 T/TA 1.55E-8 105 14.13 16.3 0 KM Plot
LAML rs603117 chr13:71355504 G/C 1.89E-5 110 0 5 16.27 KM Plot
LAML rs60426293 chr9:138980675 C/T 0.000119 109 13.2 16.17 0 KM Plot